Chapter 3 Sequence alignment

In this chapter, we mainly introduce the sequence alignment of biological molecules (such as DNA or protein), and alignment algorithms including global sequence alignment and local sequence alignment.

3.1 Guiding

3.2 The basics of sequence alignment

3.3 Pairwise alignment

3.4 Scoring matrix

3.5 Tools for alignment

3.6 Some cases

3.7 Alignment in R

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